VAT and Flat Rate Scheme — questions answered
What this page covers
Direct answers to the most common VAT questions from UK contractors and limited company directors — when to register, how the Flat Rate Scheme works, the limited cost trader trap, rates by sector, and which scheme is best for you.
When do I have to register for VAT?
Direct Answer
You must register for VAT when your taxable turnover exceeds £90,000 in any rolling 12-month period. You must register within 30 days of exceeding the threshold. You can also register voluntarily at any time below this level.
| Threshold | Amount 2025/26 |
|---|---|
| Compulsory registration | £90,000 rolling 12 months |
| Deregistration threshold | £88,000 |
| Time to register after exceeding | Within 30 days |
| Standard VAT rate | 20% |
What is the VAT Flat Rate Scheme?
Direct Answer
The FRS lets you charge clients VAT at the standard 20% but pay HMRC at a lower sector-specific flat rate — typically 14.5% for IT contractors. You keep the difference. On £100,000 turnover, this generates approximately £2,600 VAT profit per year. But the limited cost trader rule catches most pure service contractors — see below.
What are the FRS rates for contractor sectors?
| Sector | FRS rate | Year 1 rate (1% discount) |
|---|---|---|
| IT and computer services | 14.5% | 13.5% |
| Management consultancy | 14.0% | 13.0% |
| Accounting and bookkeeping | 14.5% | 13.5% |
| Engineering and technical consultancy | 14.5% | 13.5% |
| Marketing and PR | 11.0% | 10.0% |
| Design and creative | 11.0% | 10.0% |
| Limited cost trader (any sector) | 16.5% | 15.5% |
What is the limited cost trader rule — and does it apply to me?
This catches most pure service contractors
If your VAT-inclusive costs on goods are less than 2% of VAT-inclusive turnover, or less than £1,000 per year, you are a limited cost trader and must use the 16.5% FRS rate — making the scheme far less beneficial.
Software subscriptions, travel, and services do not count as goods for this test. Most pure service contractors with few physical purchases are limited cost traders.
Always model both standard VAT and FRS with your accountant before choosing. The difference can be hundreds of pounds per year in either direction.
How much can I actually save with the FRS?
Worked example — IT contractor, £100,000 turnover
| VAT-exclusive turnover | £100,000 |
| VAT charged to clients (20%) | £20,000 |
| VAT-inclusive turnover | £120,000 |
| FRS payment to HMRC (14.5% × £120,000) | £17,400 |
| VAT profit kept | £2,600/year |
| Limited cost trader — same contractor | |
| FRS payment to HMRC (16.5% × £120,000) | £19,800 |
| VAT profit kept | £200/year |
Should I register voluntarily before £90,000?
Your clients are VAT-registered and can reclaim the VAT
You buy significant equipment or software to reclaim VAT on
You want immediate FRS access and the year-1 discount
Your clients are consumers or non-VAT-registered businesses
Adding 20% to your invoices would price you out of work
You have minimal business purchases to reclaim
What is Making Tax Digital for VAT?
MTD requires all VAT-registered businesses to keep digital VAT records and submit returns using HMRC-compatible software. Mandatory for all VAT-registered businesses since April 2022 — there is no paper option. FreeAgent, Xero, and QuickBooks all comply. Your accountant handles MTD submissions as part of a full-service package.
What are the penalties for late VAT returns?
| Failure | Penalty |
|---|---|
| Late submission (new points system from Jan 2023) | 2 points per late return; £200 penalty at threshold (4 points for quarterly filers) |
| Late payment — within 15 days | 2% of outstanding VAT |
| Late payment — 16 to 30 days | 4% of outstanding VAT |
| Late payment — over 30 days | 4% plus 4% per day (annualised) |
| Interest on unpaid VAT | From the due date |
Can I leave the Flat Rate Scheme?
Yes — you can leave at any time by writing to HMRC. You must leave if your FRS-inclusive turnover exceeds £230,000 in the previous year or you expect it to in the next 30 days. Once you leave, you move to standard VAT accounting. Review whether the FRS is still beneficial annually as your business changes.
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Related guides
Choosing the right VAT scheme can be worth thousands per year.
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